BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035D01SP1|AL430035
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig401 1482 0.0
>3x_Contig401
Length = 1376
Score = 1482 bits (747), Expect = 0.0
Identities = 754/757 (99%)
Strand = Plus / Minus
Query: 143 cctatcacttttcaacaatggatatatatctttccatgtactgttacatttaatgtatgg 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1371 cctatcacttttcaacaatggatatatatctttccatgtactgttacatttaatgtatgg 1312
Query: 203 tgataattcgtcgagaagagctttgtattggtctcttgcccttctatctgatctgaaatt 262
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1311 tgataattcgtcgagaagagctttgtattggtctctgccccttctatctgatctgaaatt 1252
Query: 263 cttagaacgcaaaccttccatttccgttttgagttcagccatctttgactcaacaaaggt 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 cttagaacgcaaaccttccatttccgttttgagttcagccatctttgactcaacaaaggt 1192
Query: 323 aatgtaaattttgaaaacatcactccttgtaattgatacgaagttcttatttgaatcgaa 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 aatgtaaattttgaaaacatcactccttgtaattgatacgaagttcttatttgaatcgaa 1132
Query: 383 tcttggtgatccccatagatattttgtagcgaatttgctccatggtaagttgctggggtc 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 tcttggtgatccccatagatattttgtagcgaatttgctccatggtaagttgctggggtc 1072
Query: 443 aatatcatcggatatgctaacaaaatacagattcaattcttttaatgcctcgtttctaac 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 aatatcatcggatatgctaacaaaatacagattcaattcttttaatgcctcgtttctaac 1012
Query: 503 tttggtatgctgtgcttcgtgttcatgctgtaatgaagatatgtacctttggaacgtacg 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 tttggtatgctgtgcttcgtgttcatgctgtaatgaagatatgtacctttggaacgtacg 952
Query: 563 ctttttctgtttctcatcaatgacagaatgcttgtaaataggttcattcattatctgcct 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 ctttttctgtttctcatcaatgacagaatgcttgtaaataggttcattcattatctgcct 892
Query: 623 cttgatagttttccaacgcgaatagtaacgaatgttgggcaatttctcaagcatttctat 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 cttgatagttttccaacgcgaatagtaacgaatgttgggcaatttctcaagcatttctat 832
Query: 683 aaaggcctgttcgaatttttccaaatgttgatgctctttaatcaactccgattctgttct 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 aaaggcctgttcgaatttttccaaatgttgatgctctttaatcaactccgattctgttct 772
Query: 743 gttcgacaagaacttgtcaaacattgattgtttccacaatgggtcatcatctatgatcca 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 gttcgacaagaacttgtcaaacattgattgtttccacaatgggtcatcatctatgatcca 712
Query: 803 ataatgcggatctttgttcccaatttcgcgaataatcctattgaacgaccatgtagaatc 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ataatgcggatctttgttcccaatttcgcgaataatcctattgaacgaccatgtagaatc 652
Query: 863 cmcttcgttatcttgtaacatttgcaaaaacaccttc 899
| |||||||||||||||||||||||||||||||||||
Sbjct: 651 cacttcgttatcttgtaacatttgcaaaaacaccttc 615
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7716
Number of Sequences: 1807
Number of extensions: 7716
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)